How to Set Up & Use Proton Authenticator

    Swap risky SMS codes for an authenticator app. Install Proton Authenticator, add your accounts, and back them up so you're never locked out.

    JDCS
    By Jordan Dickson · Reviewed by CSG Security Engineers

    Updated July 2026 · 11 min read

    Your password is only ever one leak away from being useless — and billions already sit in breach databases, waiting to be tried. The real fix isn't a longer password; it's a second lock a thief can't pick even when they already have your password in hand. That's exactly what an authenticator app gives you, and Proton Authenticator — free, open-source and built by a privacy company — is one of the best. This guide walks you through setting it up and living with it day to day.
    Affiliate disclosure: Proton Authenticator and a Proton account are free, and free is all you need for syncing. If you take out a paid Proton plan through links on this page, CyberSecurityGuides may earn a commission, at no extra cost to you — it never changes what we recommend.

    How an authenticator app protects you

    Most accounts are guarded by just a password — and passwords get phished, guessed, reused and spilled in data breaches every single day. Two-factor authentication (2FA) adds a second lock: something you have as well as something you know. Even if an attacker steals your password, they still can't get in without the second factor sitting on your device. An authenticator app is the strongest everyday form of that second factor — far safer than a code texted to your number.

    How it actually works

    When you switch on 2FA for an account, it quietly shares a one-time secret with your app — that's all the QR code really is. From then on, your app and the account's server each mix that secret with the current time to independently produce the same 6-digit code, which rolls over about every 30 seconds. Because the code is generated on your device and never sent across the network, there's nothing for anyone to intercept — and each code is useless the moment its short window passes. (The open standard behind this is called TOTP, time-based one-time passwords, which is why one authenticator app works for thousands of different services.)

    Where Proton Authenticator fits in

    Proton Authenticator is Proton's take on this — a free, open-source authenticator app that runs on iPhone, Android, Windows, macOS and Linux. It generates your codes locally like any authenticator, but adds something many rivals don't: optional end-to-end encrypted sync, so your codes are safely backed up and mirrored across your devices without Proton ever being able to read them. You don't even need a Proton account to use it — and there are no ads and no tracking, because Proton's model is privacy, not data.

    Why not just use SMS?

    Text-message codes can be intercepted, phished, or stolen with a SIM-swap. An authenticator app generates codes on your device — nothing is sent over the network, so there's nothing to intercept. It's the single biggest upgrade to your two-factor security.

    Set it up, step by step

    The steps below use Gmail as the worked example, protected with Proton Authenticator. The process is much the same on almost any provider — the account shows you a QR code, your authenticator scans it — but where that setting lives varies quite a bit from one service to the next. A good place to start looking is the account’s Security section, under sign-in options or two-factor authentication. Plenty of providers file it somewhere less obvious than that, though, so it is worth searching their help pages for “two-factor” or checking our account hardening guides, which give provider-by-provider instructions.
    1

    Install Proton Authenticator

    Get the app from your phone's app store, or download the desktop version from proton.me/authenticator. It's free and runs on iPhone, Android, Windows, macOS and Linux.
    9:41
    Search

    Proton Authenticator

    Secure two-factor codes

    GET

    Ratings

    4.8

    ★★★★★

    Age

    4+

    Years Old

    Chart

    No.4

    Utilities

    Developer

    Proton AG

    Also Included In

    Proton: Privacy by default

    Productivity

    View

    No account needed

    You don't need a Proton account to use it.
    2

    Open it and get to your vault

    Open the app and you get a short welcome screen — tap Get started. It then offers to import codes from another authenticator.

    If you are moving off Google Authenticator, Authy or similar, that import is the quickest way to bring everything across. If you are setting up two-factor for the first time, tap Skip — there is nothing to bring over yet. Either way you land on your vault, which starts empty.

    9:41

    Authenticator

    Amazon23

    920 827

    Netflix23

    337 556

    Ubiquiti23

    038 907

    Security in every code

    Use two-factor authentication to safeguard your accounts.

    Get started

    Proton | Privacy by default

    Proton Authenticator first run on iPhone: the Security in every code welcome screen, tapping Get started, the Import codes screen with Import and Skip, tapping Skip, then the empty vault reading No codes yet with Create new code and Import codes buttons

    3

    Add your first account

    Do this part on a computer if you can. Open the account you are protecting on a device other than your phone — your phone needs its camera free to scan the QR code the account puts on screen, so having that code on a second screen makes the whole thing far easier.

    Two-factor is switched on from the account you want to protect, not from the authenticator app. Start with your email — whoever controls that can reset the password on everything else you own.

    Taking Gmail as the example: go to myaccount.google.com, open Security, then 2-Step Verification, and choose Authenticator. Google shows you a QR code, exactly as in the example above. Leave it on screen — that is what your phone is about to read.

    myaccount.google.com/security
    Google Account
    Search Google Account
    A
    Home
    Wallet & subscriptions
    Personal info
    Security & sign-in
    Google password
    Linked apps
    Data & privacy
    People & sharing
    Family
    Account storage

    Security & sign-in

    How you sign in to Google

    Make sure you can always access your Google Account by keeping this information up to date.

    2-Step Verification

    ● Off

    Password

    Last changed 8 months ago

    Passkeys and security keys

    Not set up

    Google Account security in a browser: opening 2-Step Verification, choosing Authenticator, then the Set up authenticator app dialog showing the QR code to scan

    4

    Add it to your authenticator app

    With that QR code still on screen, pick up your phone and open Proton Authenticator. Tap Create new code — the first time, iOS or Android will ask permission to use the camera, so tap Allow. Then point the camera at the code on your computer.

    That is the whole handover. The QR contains a one-time secret shared between the account and your app — once it is scanned, the account appears in your vault and immediately starts generating 6-digit codes that change every 30 seconds.

    9:41

    Point your camera at the QR code

    Enter manually

    “Proton Authenticator” Would Like to Access the Camera

    Need the usage of the camera to be able to scan 2fa codes

    Don’t Allow
    Allow

    Proton Authenticator on iPhone: the iOS prompt asking to access the camera to scan 2FA codes, tapping Allow, the viewfinder framing the QR code shown on a computer screen, then the vault with the Google account added and showing a 6-digit code with its countdown ring and the next code

    5

    Verify the code to finish

    Continuing with our Google example: back on the computer, the account asks for a code to prove the pairing worked. Read the 6-digit code next to the account in Proton Authenticator, type it in, and choose Verify. The account confirms the authenticator has been added, and it is protected from this point on.

    Watch the little ring beside the code as you do it. Each code is only valid for about 30 seconds — if the ring runs out mid-typing, just use the fresh one that replaces it.

    myaccount.google.com/two-step-verification/authenticator
    Google AccountA

    Authenticator app

    Instead of waiting for text messages, get verification codes from an authenticator app. It works even if your phone is offline.

    First, download Google Authenticator from the Google Play Store or the iOS App Store.

    Set up authenticator

    Set up authenticator app

    Enter the 6-digit code you see in the app

    Enter Code
    Back
    Cancel
    Verify

    Google Account in a browser asking for the 6-digit code from the authenticator app, the code being typed in and Verify clicked, then a confirmation that the authenticator app has been added

    This is how every sign-in works from now on

    That is exactly how signing in works from now on, on any account you protect this way. Whenever a site asks for your second step, open the app and read off the current code. No texts, no waiting for a message that may never arrive — and because the codes are generated on your device, it works with no signal and no internet connection at all.
    6

    Back up so you're never locked out

    An authenticator app generates its codes entirely offline. That is its great strength — nothing to intercept, nothing to SIM-swap, and it works with no signal at all — but it is also its one real weakness. If you lose the phone, or the app, and you have no other copy of those codes, you can be locked out of every account it was protecting. There is no “email me a reset” for an authenticator.

    The best answer is backup codes, which some providers call recovery codes: a set of one-time codes the account issues for exactly this situation. They are offline too, which is the point — they are a second offline route in, kept separately from the app. Continuing with our Google example, they live under Security → 2-Step Verification → Backup codes; choose Get backup codes and download or print the ten you are given. Each works once, in place of an authenticator code.

    Store them somewhere you can reach without your phone — printed and put away, or in a password manager on another device. Saving them onto the same phone that holds your authenticator defeats the point entirely. Whenever an account offers them, take them.

    myaccount.google.com/signinoptions/twosv
    Google AccountA

    2-Step Verification

    Your account is protected with 2-Step Verification

    Keep your second steps up to date and add more sign-in options.

    Second steps

    Passkeys and security keys

    !Add a passkey

    Authenticator

    Added just now

    Phone number

    !Add a phone number
    123

    Backup codes

    !Get backup codes

    Google Account security in a browser: opening Backup codes from the 2-Step Verification page, choosing Get backup codes, the list of ten one-time codes, then downloading them

    No backup or recovery codes available?

    Not every account offers them. Look at what else it gives you for recovery: a passkey, or a recovery address on a secure, well-protected inbox such as Proton Mail, is a far better fallback than SMS — text codes can be intercepted or stolen outright with a SIM swap. Sometimes SMS is the only option a provider supports, and in that case take it rather than nothing: being locked out is the worse outcome. Just make sure the number on the account is one you control, and replace it with something stronger if the provider ever adds the option.

    Moving from another authenticator app

    If your codes already live in Google Authenticator, Authy, Microsoft Authenticator or a password manager, you do not have to add every account again by hand. The Import codes option we skipped back in step 2 exists for exactly this, and it is still there later under Settings if you have already finished setting the app up.
    Most authenticators can export what they hold, usually as a file or as a QR code you scan. Proton Authenticator reads the common formats, so moving across is generally a case of exporting from the old app and importing here — rather than visiting a dozen accounts and setting each one up from scratch.

    Check it worked before you delete the old app

    Before you delete anything, sign in to one of the imported accounts using a code from Proton Authenticator, and check it works. Keep the old app installed until you have confirmed a couple. If the export produced a file, delete it once you are done — it holds the secrets behind every one of your codes, and anyone who gets it can generate them too.

    Optional: link a Proton account to sync your codes

    You do not need an account for any of the above — Proton Authenticator works perfectly well without one, and everything simply stays on the one device. That is a genuinely reasonable way to use it, and some people prefer that nothing ever leaves the phone.
    If you would rather not depend on a single device, though, signing in with a Proton account syncs your codes, end-to-end encrypted, to every device you install the app on. Replace a phone and your codes are already waiting. A free Proton account covers this.
    If you do go that route, it is worth knowing what it changes: that account becomes the thing standing between an attacker and every two-factor code you own. So secure it properly first — a long unique password, its own two-factor switched on, and a recovery method you actually control — before you sync anything to it, rather than after.

    Proton Mail Plus

    Private, end-to-end encrypted email with more storage, your own custom domain and extra aliases — ideal if a secure inbox is all you are after. A free account already covers syncing your codes.

    Get Mail Plus
    Proton Unlimited

    One encrypted account behind your codes, your mail and your passwords

    Mail, VPN, Pass, Drive and Calendar in a single plan — including a password manager that pairs naturally with the two-factor codes you have just set up.

    • End-to-end encrypted
    • Swiss-based, no ads
    • One plan, every app

    Secure the Proton account first

    If you are going to keep your two-factor codes there, the Proton account itself needs to be locked down properly — password, its own 2FA, and recovery you control. It takes a few minutes and it is the difference between a safe backup and a single point of failure.
    How to secure a Proton account

    Frequently asked questions

    Is Proton Authenticator free?
    Yes — completely free and open-source, and you do not need an account at all to use it. Signing in with a free Proton account is optional, and only adds encrypted syncing across your devices. If you do sync, secure that Proton account properly: it then guards every code you own.
    Does it work for non-Proton accounts?
    Absolutely. It works with any service that supports authenticator-app (TOTP) two-factor — Google, Microsoft, GitHub, your bank, social media, and thousands more.
    Does it work offline?
    Yes. Codes are generated on your device from a shared secret and the current time, so they work with no internet connection at all.
    How is it different from Proton Pass?
    Proton Authenticator is a dedicated app for two-factor codes. Proton Pass is a password manager that can also store passwords and 2FA codes together. Either works — use Authenticator if you'd rather keep your second factor separate from your passwords.
    What if I lose my phone?
    Use the backup codes you saved for each account — that is exactly what they are for, and it is why the guide pushes you to save them. If you also switched on syncing with a Proton account, your codes are already waiting on any other device: just install the app and sign in. With neither, you are left with each account's own recovery process, which is slower and occasionally impossible.

    What to do next

    Put it to work

    Now you have an authenticator app, turn two-factor on everywhere it matters — starting with your email, since that is the key to resetting every other account you own.
    How to secure your email account

    Go further

    Pair strong two-factor with tools that are private by design — encrypted email, a VPN, a password manager and cloud storage, all under one account and none of them reading your data.
    Why switch to Proton

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    JD

    Written by

    Jordan Dickson

    Founder, CyberSecurityGuides

    Founder of CyberSecurityGuides, writing practical, jargon-free guides that help everyday people recover from and protect against online attacks.

    Reviewed by CSG Security Engineers

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